Package: jlmerclusterperm 1.1.4

jlmerclusterperm: Cluster-Based Permutation Analysis for Densely Sampled Time Data

An implementation of fast cluster-based permutation analysis (CPA) for densely-sampled time data developed in Maris & Oostenveld, 2007 <doi:10.1016/j.jneumeth.2007.03.024>. Supports (generalized, mixed-effects) regression models for the calculation of timewise statistics. Provides both a wholesale and a piecemeal interface to the CPA procedure with an emphasis on interpretability and diagnostics. Integrates 'Julia' libraries 'MixedModels.jl' and 'GLM.jl' for performance improvements, with additional functionalities for interfacing with 'Julia' from 'R' powered by the 'JuliaConnectoR' package.

Authors:June Choe [aut, cre, cph]

jlmerclusterperm_1.1.4.tar.gz
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jlmerclusterperm_1.1.4.tgz(r-4.4-any)jlmerclusterperm_1.1.4.tgz(r-4.3-any)
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jlmerclusterperm.pdf |jlmerclusterperm.html✨
jlmerclusterperm/json (API)
NEWS

# Install 'jlmerclusterperm' in R:
install.packages('jlmerclusterperm', repos = c('https://yjunechoe.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/yjunechoe/jlmerclusterperm/issues

Pkgdown site:https://yjunechoe.github.io

On CRAN:

cluster-based-permutation-testeegeyetrackingmixed-effects-modelstimeseries

6.04 score 12 stars 14 scripts 672 downloads 23 exports 16 dependencies

Last updated 3 months agofrom:53cefa7ad7. Checks:6 OK, 1 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 09 2025
R-4.5-winOKJan 09 2025
R-4.5-linuxOKJan 09 2025
R-4.4-winNOTEJan 09 2025
R-4.4-macOKJan 09 2025
R-4.3-winOKJan 09 2025
R-4.3-macOKJan 09 2025

Exports:calculate_clusters_pvaluesclusterpermuteclusters_are_comparablecompute_timewise_statisticsextract_empirical_clustersextract_null_cluster_distsget_rng_seedget_rng_stateglancejlmerjlmerclusterperm_setupjulia_progressjulia_setup_okmake_jlmer_specpermute_by_predictorpermute_timewise_statisticsreset_rng_stateset_rng_seedset_rng_statestopJuliatidyto_jlmerwalk_threshold_steps

Dependencies:backportsbootcligenericsJuliaConnectoRJuliaFormulaelatticelme4MASSMatrixminqanlmenloptrRcppRcppEigenrrapply

Introduction to jlmerclusterperm

Rendered fromjlmerclusterperm.Rmdusingknitr::rmarkdownon Jan 09 2025.

Last update: 2024-09-04
Started: 2023-06-07