Package: jlmerclusterperm 1.1.4

jlmerclusterperm: Cluster-Based Permutation Analysis for Densely Sampled Time Data

An implementation of fast cluster-based permutation analysis (CPA) for densely-sampled time data developed in Maris & Oostenveld, 2007 <doi:10.1016/j.jneumeth.2007.03.024>. Supports (generalized, mixed-effects) regression models for the calculation of timewise statistics. Provides both a wholesale and a piecemeal interface to the CPA procedure with an emphasis on interpretability and diagnostics. Integrates 'Julia' libraries 'MixedModels.jl' and 'GLM.jl' for performance improvements, with additional functionalities for interfacing with 'Julia' from 'R' powered by the 'JuliaConnectoR' package.

Authors:June Choe [aut, cre, cph]

jlmerclusterperm_1.1.4.tar.gz
jlmerclusterperm_1.1.4.zip(r-4.7)jlmerclusterperm_1.1.4.zip(r-4.6)jlmerclusterperm_1.1.4.zip(r-4.5)
jlmerclusterperm_1.1.4.tgz(r-4.6-any)jlmerclusterperm_1.1.4.tgz(r-4.5-any)
jlmerclusterperm_1.1.4.tar.gz(r-4.7-any)jlmerclusterperm_1.1.4.tar.gz(r-4.6-any)
jlmerclusterperm_1.1.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
jlmerclusterperm/json (API)
NEWS

# Install 'jlmerclusterperm' in R:
install.packages('jlmerclusterperm', repos = c('https://yjunechoe.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yjunechoe/jlmerclusterperm/issues

Pkgdown/docs site:https://yjunechoe.github.io

On CRAN:

Conda:

cluster-based-permutation-testeegeyetrackingmixed-effects-modelstimeseries

4.99 score 14 stars 14 scripts 643 downloads 23 exports 20 dependencies

Last updated from:a16a95cde5. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK167
source / vignettesOK201
linux-release-x86_64OK165
macos-release-arm64OK112
macos-oldrel-arm64OK101
windows-develOK420
windows-releaseOK464
windows-oldrelOK403
wasm-releaseOK121

Exports:calculate_clusters_pvaluesclusterpermuteclusters_are_comparablecompute_timewise_statisticsextract_empirical_clustersextract_null_cluster_distsget_rng_seedget_rng_stateglancejlmerjlmerclusterperm_setupjulia_progressjulia_setup_okmake_jlmer_specpermute_by_predictorpermute_timewise_statisticsreset_rng_stateset_rng_seedset_rng_statestopJuliatidyto_jlmerwalk_threshold_steps

Dependencies:backportsbootcligenericsJuliaConnectoRJuliaFormulaelatticelme4MASSMatrixminqanlmenloptrrbibutilsRcppRcppEigenRdpackreformulasrlangrrapply

Introduction to jlmerclusterperm

Rendered fromjlmerclusterperm.Rmdusingknitr::rmarkdownon May 16 2026.

Last update: 2024-09-04
Started: 2023-06-07