Package: jlmerclusterperm 1.1.4

jlmerclusterperm: Cluster-Based Permutation Analysis for Densely Sampled Time Data

An implementation of fast cluster-based permutation analysis (CPA) for densely-sampled time data developed in Maris & Oostenveld, 2007 <doi:10.1016/j.jneumeth.2007.03.024>. Supports (generalized, mixed-effects) regression models for the calculation of timewise statistics. Provides both a wholesale and a piecemeal interface to the CPA procedure with an emphasis on interpretability and diagnostics. Integrates 'Julia' libraries 'MixedModels.jl' and 'GLM.jl' for performance improvements, with additional functionalities for interfacing with 'Julia' from 'R' powered by the 'JuliaConnectoR' package.

Authors:June Choe [aut, cre, cph]

jlmerclusterperm_1.1.4.tar.gz
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jlmerclusterperm_1.1.4.tgz(r-4.5-any)jlmerclusterperm_1.1.4.tgz(r-4.4-any)jlmerclusterperm_1.1.4.tgz(r-4.3-any)
jlmerclusterperm_1.1.4.tar.gz(r-4.5-noble)jlmerclusterperm_1.1.4.tar.gz(r-4.4-noble)
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jlmerclusterperm.pdf |jlmerclusterperm.html✨
jlmerclusterperm/json (API)
NEWS

# Install 'jlmerclusterperm' in R:
install.packages('jlmerclusterperm', repos = c('https://yjunechoe.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yjunechoe/jlmerclusterperm/issues

Pkgdown site:https://yjunechoe.github.io

On CRAN:

Conda:

cluster-based-permutation-testeegeyetrackingmixed-effects-modelstimeseries

5.86 score 13 stars 14 scripts 898 downloads 23 exports 19 dependencies

Last updated 9 days agofrom:a16a95cde5. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 10 2025
R-4.5-winOKMar 10 2025
R-4.5-macOKMar 10 2025
R-4.5-linuxOKMar 10 2025
R-4.4-winOKMar 10 2025
R-4.4-macOKMar 10 2025
R-4.4-linuxOKMar 10 2025
R-4.3-winOKMar 10 2025
R-4.3-macOKMar 10 2025

Exports:calculate_clusters_pvaluesclusterpermuteclusters_are_comparablecompute_timewise_statisticsextract_empirical_clustersextract_null_cluster_distsget_rng_seedget_rng_stateglancejlmerjlmerclusterperm_setupjulia_progressjulia_setup_okmake_jlmer_specpermute_by_predictorpermute_timewise_statisticsreset_rng_stateset_rng_seedset_rng_statestopJuliatidyto_jlmerwalk_threshold_steps

Dependencies:backportsbootcligenericsJuliaConnectoRJuliaFormulaelatticelme4MASSMatrixminqanlmenloptrrbibutilsRcppRcppEigenRdpackreformulasrrapply

Introduction to jlmerclusterperm

Rendered fromjlmerclusterperm.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-09-04
Started: 2023-06-07