Package: jlmerclusterperm 1.1.4

jlmerclusterperm: Cluster-Based Permutation Analysis for Densely Sampled Time Data

An implementation of fast cluster-based permutation analysis (CPA) for densely-sampled time data developed in Maris & Oostenveld, 2007 <doi:10.1016/j.jneumeth.2007.03.024>. Supports (generalized, mixed-effects) regression models for the calculation of timewise statistics. Provides both a wholesale and a piecemeal interface to the CPA procedure with an emphasis on interpretability and diagnostics. Integrates 'Julia' libraries 'MixedModels.jl' and 'GLM.jl' for performance improvements, with additional functionalities for interfacing with 'Julia' from 'R' powered by the 'JuliaConnectoR' package.

Authors:June Choe [aut, cre, cph]

jlmerclusterperm_1.1.4.tar.gz
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jlmerclusterperm_1.1.4.tgz(r-4.4-any)jlmerclusterperm_1.1.4.tgz(r-4.3-any)
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jlmerclusterperm.pdf |jlmerclusterperm.html✨
jlmerclusterperm/json (API)
NEWS

# Install 'jlmerclusterperm' in R:
install.packages('jlmerclusterperm', repos = c('https://yjunechoe.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/yjunechoe/jlmerclusterperm/issues

On CRAN:

cluster-based-permutation-testeegeyetrackingmixed-effects-modelstimeseries

6.03 score 11 stars 14 scripts 726 downloads 23 exports 16 dependencies

Last updated 13 days agofrom:53cefa7ad7. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 10 2024
R-4.5-winOKNov 10 2024
R-4.5-linuxOKNov 10 2024
R-4.4-winOKNov 10 2024
R-4.4-macOKNov 10 2024
R-4.3-winOKNov 10 2024
R-4.3-macOKNov 10 2024

Exports:calculate_clusters_pvaluesclusterpermuteclusters_are_comparablecompute_timewise_statisticsextract_empirical_clustersextract_null_cluster_distsget_rng_seedget_rng_stateglancejlmerjlmerclusterperm_setupjulia_progressjulia_setup_okmake_jlmer_specpermute_by_predictorpermute_timewise_statisticsreset_rng_stateset_rng_seedset_rng_statestopJuliatidyto_jlmerwalk_threshold_steps

Dependencies:backportsbootcligenericsJuliaConnectoRJuliaFormulaelatticelme4MASSMatrixminqanlmenloptrRcppRcppEigenrrapply

Introduction to jlmerclusterperm

Rendered fromjlmerclusterperm.Rmdusingknitr::rmarkdownon Nov 10 2024.

Last update: 2024-09-04
Started: 2023-06-07